endstate_correction.protocol

Provide functions for the endstate correction workflow.

Functions

perform_endstate_correction

Perform endstate correction using the provided protocol.

Classes

AllProtocol

Dataclass for running all protocols

AllResults

Dataclass for combined results of all protocols

BSSProtocol

This is a dataclass mimicking the BioSimSpace.Protocol.

BaseProtocol

Base class for all endstate correction protocols

BaseResults

Base class for all protocol results

EquResults

Equilibrium simulation-specific results

FEPProtocol

FEP-specific protocol

FEPResults

FEP-specific results

NEQProtocol

NEQ-specific protocol

NEQResults

Provides a dataclass containing the results of a protocol

SMCProtocol

SMC-specific protocol

SMCResults